Basic Information
Locus ID:
Lb2G08516
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
VWA / Hh protein intein-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 17249167 | 17250532 | - | Lb2G08516 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 37,631.28 Da | 55.93 | 84.94 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 138 | 205 | 6.6E-13 | IPR032838 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 138 | 205 | 6.6E-13 | IPR032838 |
| SUPERFAMILY | SSF56219 | DNase I-like | 254 | 316 | 1.7E-6 | IPR036691 |
| SUPERFAMILY | SSF56219 | DNase I-like | 254 | 316 | 1.7E-6 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 212 | 323 | 2.3E-5 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 212 | 323 | 2.3E-5 | IPR036691 |
| Coils | Coil | Coil | 138 | 158 | - | - |
| Coils | Coil | Coil | 138 | 158 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08050.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_034698429.1 | E3 ubiquitin-protein ligase WAV3-like [Vitis riparia] | 0 |
| TrEMBL | A0A438HTN8 | Vwaint domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_039761 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||