Basic Information
Locus ID:
Lb2G08380
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 11773051 | 11775604 | + | Lb2G08380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 45,408.24 Da | 44.77 | 81.62 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 84 | 159 | 5.25704E-12 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 84 | 159 | 5.25704E-12 | - |
| Pfam | PF00651 | BTB/POZ domain | 85 | 167 | 2.1E-12 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 85 | 167 | 2.1E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 86 | 166 | 2.51E-10 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 86 | 166 | 2.51E-10 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 173 | 7.1E-16 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 174 | 271 | 2.3E-11 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 174 | 271 | 2.3E-11 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 173 | 7.1E-16 | IPR011333 |
| SMART | SM00875 | BACK_2 | 149 | 255 | 1.0E-5 | IPR011705 |
| SMART | SM00875 | BACK_2 | 149 | 255 | 1.0E-5 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 84 | 144 | 9.144489 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 84 | 144 | 9.144489 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_048320092.1 | BTB/POZ domain-containing protein POB1-like isoform X2 [Ziziphus jujuba var. spinosa] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6P3YXP2 | BTB/POZ domain-containing protein POB1-like isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107406735 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||