Basic Information
Locus ID:
Lb2G08379
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 11497079 | 11499605 | + | Lb2G08379 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 54,225.70 Da | 45.88 | 92.72 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 361 | 470 | 3.7951E-8 | IPR002083 |
| CDD | cd00121 | MATH | 361 | 470 | 3.7951E-8 | IPR002083 |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 84 | 159 | 3.34399E-12 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 84 | 159 | 3.34399E-12 | - |
| Pfam | PF00651 | BTB/POZ domain | 85 | 172 | 1.2E-12 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 200 | 291 | 4.0E-10 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 200 | 291 | 4.0E-10 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 85 | 172 | 1.2E-12 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 359 | 471 | 5.4E-10 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 86 | 173 | 6.43E-12 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 86 | 173 | 6.43E-12 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 359 | 471 | 5.4E-10 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 205 | 308 | 1.2E-11 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 28 | 198 | 1.9E-16 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 205 | 308 | 1.2E-11 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 28 | 198 | 1.9E-16 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 344 | 474 | 1.5E-9 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 344 | 474 | 1.5E-9 | IPR008974 |
| SMART | SM00875 | BACK_2 | 193 | 292 | 0.009 | IPR011705 |
| SMART | SM00225 | BTB_4 | 35 | 176 | 2.4E-4 | IPR000210 |
| SMART | SM00225 | BTB_4 | 35 | 176 | 2.4E-4 | IPR000210 |
| SMART | SM00875 | BACK_2 | 193 | 292 | 0.009 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 61 | 144 | 9.123807 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 61 | 144 | 9.123807 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_031377581.1 | BTB/POZ domain-containing protein POB1-like isoform X2 [Punica granatum] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4G9U0 | BTB/POZ domain-containing protein POB1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109005997 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||