Basic Information
Locus ID:
Lb2G08373
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 11381864 | 11383973 | + | Lb2G08373 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 55,993.60 Da | 44.44 | 87.68 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 98 | 173 | 3.4543E-11 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 98 | 173 | 3.4543E-11 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 214 | 305 | 5.0E-8 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 214 | 305 | 5.0E-8 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 99 | 186 | 2.6E-12 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 99 | 186 | 2.6E-12 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 371 | 485 | 1.77E-7 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 371 | 485 | 1.77E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 99 | 187 | 1.33E-11 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 99 | 187 | 1.33E-11 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 358 | 487 | 1.0E-6 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 87 | 202 | 7.6E-16 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 219 | 328 | 2.0E-9 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 219 | 328 | 2.0E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 358 | 487 | 1.0E-6 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 87 | 202 | 7.6E-16 | IPR011333 |
| SMART | SM00225 | BTB_4 | 87 | 190 | 0.0029 | IPR000210 |
| SMART | SM00225 | BTB_4 | 87 | 190 | 0.0029 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 98 | 158 | 8.896306 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 98 | 158 | 8.896306 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_031377581.1 | BTB/POZ domain-containing protein POB1-like isoform X2 [Punica granatum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B6ZJX8 | Putative BTB/POZ domain-containing protein POB1-like OS=Davidia involucrata OX=16924 GN=Din_013676 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||