Basic Information
Locus ID:
Lb2G08329
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 9900331 | 9901345 | - | Lb2G08329 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 29,181.08 Da | 46.13 | 91.20 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07707 | BTB And C-terminal Kelch | 24 | 115 | 1.4E-8 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 24 | 115 | 1.4E-8 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 132 | 246 | 1.44E-8 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 132 | 246 | 1.44E-8 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 110 | 248 | 3.1E-7 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 12 | 80 | 3.9E-5 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 110 | 248 | 3.1E-7 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 12 | 80 | 3.9E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01160.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_011093067.1 | BTB/POZ domain-containing protein POB1-like isoform X3 [Sesamum indicum] | 0 |
| O04615 | BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana OX=3702 GN=At4g01160 PE=3 SV=1 | 0 | |
| TrEMBL | A0A078HZ99 | BnaC04g01060D protein OS=Brassica napus OX=3708 GN=BnaC04g01060D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||