Basic Information
Locus ID:
Lb2G08271
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 5416294 | 5418278 | - | Lb2G08271 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 44,462.62 Da | 45.51 | 88.20 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 92 | 160 | 6.05678E-12 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 92 | 160 | 6.05678E-12 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 198 | 291 | 4.4E-10 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 86 | 174 | 7.8E-14 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 86 | 174 | 7.8E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 198 | 291 | 4.4E-10 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 88 | 174 | 2.51E-13 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 88 | 174 | 2.51E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 188 | 308 | 5.3E-11 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 187 | 1.5E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 187 | 1.5E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 188 | 308 | 5.3E-11 | - |
| SMART | SM00875 | BACK_2 | 186 | 293 | 3.2E-6 | IPR011705 |
| SMART | SM00225 | BTB_4 | 73 | 177 | 1.6E-9 | IPR000210 |
| SMART | SM00225 | BTB_4 | 73 | 177 | 1.6E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 186 | 293 | 3.2E-6 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 70 | 145 | 11.150643 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 70 | 145 | 11.150643 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_047335079.1 | BTB/POZ domain-containing protein POB1-like [Impatiens glandulifera] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A4P8K8 | Putative chromatin remodeling & transcription regulator BTB-POZ family OS=Lupinus albus OX=3870 GN=Lal_00003989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||