Basic Information
Locus ID:
Lb2G08270
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 5362617 | 5366504 | - | Lb2G08270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 69,340.31 Da | 43.30 | 91.53 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07707 | BTB And C-terminal Kelch | 347 | 440 | 9.2E-10 | IPR011705 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 64 | 288 | 2.3E-62 | IPR013103 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 347 | 440 | 9.2E-10 | IPR011705 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 64 | 288 | 2.3E-62 | IPR013103 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 63 | 283 | 1.53E-17 | IPR043502 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 63 | 283 | 1.53E-17 | IPR043502 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 231 | 339 | 1.9E-5 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 340 | 457 | 1.1E-10 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 231 | 339 | 1.9E-5 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 340 | 457 | 1.1E-10 | - |
| SMART | SM00875 | BACK_2 | 335 | 442 | 3.2E-6 | IPR011705 |
| SMART | SM00875 | BACK_2 | 335 | 442 | 3.2E-6 | IPR011705 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_042982037.1 | uncharacterized protein LOC122311522 isoform X1 [Carya illinoinensis] | 0 |
| Q9ZT94 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 | 0 | |
| TrEMBL | A0A833Y1E3 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Juglans regia OX=51240 GN=F2P56_007367 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||