Basic Information
Locus ID:
Lb2G08208
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Phosphatidylinositol 4-kinase gamma 2-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 3643067 | 3644990 | + | Lb2G08208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 64,670.35 Da | 37.18 | 99.76 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 102 | 174 | 2.04215E-6 | - |
| CDD | cd17039 | Ubl_ubiquitin_like | 102 | 174 | 2.04215E-6 | - |
| Pfam | PF00240 | Ubiquitin family | 102 | 177 | 2.3E-5 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 31 | 96 | 4.1E-14 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 275 | 527 | 4.3E-47 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 102 | 177 | 2.3E-5 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 275 | 527 | 4.3E-47 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 31 | 96 | 4.1E-14 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 20 | 97 | 4.84E-15 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 98 | 178 | 4.14E-8 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 416 | 579 | 4.18E-8 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 416 | 579 | 4.18E-8 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 98 | 178 | 4.14E-8 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 20 | 97 | 4.84E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 15 | 98 | 9.6E-14 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 100 | 181 | 3.7E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 15 | 98 | 9.6E-14 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 100 | 181 | 3.7E-7 | - |
| SMART | SM00213 | ubq_7 | 100 | 176 | 5.7 | IPR000626 |
| SMART | SM00213 | ubq_7 | 100 | 176 | 5.7 | IPR000626 |
| SMART | SM00213 | ubq_7 | 24 | 95 | 3.3E-6 | IPR000626 |
| SMART | SM00213 | ubq_7 | 24 | 95 | 3.3E-6 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 22 | 95 | 12.726931 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 22 | 95 | 12.726931 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 100 | 161 | 10.070333 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 100 | 161 | 10.070333 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24240.1 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein. | 0 |
| RefSeq | XP_017973766.1 | PREDICTED: phosphatidylinositol 4-kinase gamma 2 [Theobroma cacao] | 0 |
| Q9FNF8 | Phosphatidylinositol 4-kinase gamma 3 OS=Arabidopsis thaliana OX=3702 GN=PI4KG3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A061G5C3 | 1-phosphatidylinositol 4-kinase OS=Theobroma cacao OX=3641 GN=TCM_016485 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology