halophFGD

Basic Information

Locus ID: Lb1G08079

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: glutamine synthetase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr01	535409557	535413226	+	Lb1G08079

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.88	32,943.41 Da	42.99	89.56	-0.08

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	164	231	8.9E-8	IPR003653
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	164	231	8.9E-8	IPR003653
SUPERFAMILY	SSF54001	Cysteine proteinases	160	240	1.57E-11	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	160	240	1.57E-11	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	105	247	1.9E-9	-
Gene3D	G3DSA:3.30.590.10	Glutamine synthetase/guanido kinase, catalytic domain	250	292	2.4E-8	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	105	247	1.9E-9	-
Gene3D	G3DSA:3.30.590.10	Glutamine synthetase/guanido kinase, catalytic domain	250	292	2.4E-8	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	31	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	31	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

KEGG Pathway

KO Term:

K01915 (glutamine synthetase [EC:6.3.1.2])

Pathway:

ko00220 (Arginine biosynthesis) map00220 (Arginine biosynthesis) ko00250 (Alanine, aspartate and glutamate metabolism) map00250 (Alanine, aspartate and glutamate metabolism) ko00630 (Glyoxylate and dicarboxylate metabolism) map00630 (Glyoxylate and dicarboxylate metabolism) ko00910 (Nitrogen metabolism) map00910 (Nitrogen metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko01230 (Biosynthesis of amino acids) map01230 (Biosynthesis of amino acids) ko02020 (Two-component system) map02020 (Two-component system) map04217 (Necroptosis)

Reaction:

R00253 (ATP + L-Glutamate + Ammonia <=> ADP + Orthophosphate + L-Glutamine)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G17820.1	glutamine synthetase 1.3. encodes a cytosolic glutamine synthetase, the enzyme has low affinity with substrate ammonium
RefSeq	XP_050904519.1	glutamine synthetase nodule isozyme-like [Pisum sativum]
Swiss-Prot	Q9LVI8	Glutamine synthetase cytosolic isozyme 1-3 OS=Arabidopsis thaliana OX=3702 GN=GLN1-3 PE=1 SV=1
TrEMBL	S5U5Y3	glutamine synthetase (Fragment) OS=Ruschia barnardii OX=1352191 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047