Basic Information
Locus ID:
Lb1G08037
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Brca1-associated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 519724076 | 519726538 | - | Lb1G08037 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 19,813.81 Da | 27.29 | 82.44 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 36 | 68 | 1.35E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 36 | 68 | 1.35E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 18 | 72 | 3.1E-6 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 18 | 72 | 3.1E-6 | IPR013083 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26000.2 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_050884491.1 | BRAP2 RING ZnF UBP domain-containing protein 2 [Pisum sativum] | 0 |
| O80996 | BRAP2 RING ZnF UBP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BRIZ2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A392MHJ6 | Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0007836 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||