HalophFGD

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Basic Information
Locus ID: Lb1G07944
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: May be involved in both secretory and endocytic intracellular trafficking in the endosomal prevacuolar compartments
Maps and Mapping Data
Chromosome Start End Strand ID
chr01 504344301 504353411 + Lb1G07944
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.13 43,893.60 Da 42.75 90.41 -0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03208 PRA1 family protein 245 366 4.0E-25 IPR004895
Pfam PF03208 PRA1 family protein 245 366 4.0E-25 IPR004895
KEGG Pathway
KO Term:
K20359 (PRA1 family protein 1)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G08770.1 prenylated RAB acceptor 1.E. 0
RefSeq XP_034686107.1 PRA1 family protein E-like [Vitis riparia] 0
Swiss-Prot Q9FRR1 PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1 0
TrEMBL A0A438KL63 PRA1 family protein OS=Vitis vinifera OX=29760 GN=PRA1F2_6 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 54 Lb0G38191, Lb1G00152, Lb1G01738, Lb1G01898, Lb1G01970 ...
Lb1G02170, Lb1G03410, Lb1G04802, Lb1G04860, Lb1G04877, Lb1G07890, Lb1G07944, Lb2G08659, Lb2G09586, Lb2G09591, Lb2G10075, Lb2G10475, Lb2G10578, Lb2G10668, Lb2G11077, Lb2G11289, Lb2G11804, Lb2G11954, Lb2G12095, Lb2G12133, Lb2G13366, Lb2G13379, Lb3G15831, Lb3G15867, Lb3G16624, Lb3G16954, Lb3G18832, Lb4G22893, Lb4G23098, Lb4G23597, Lb4G23677, Lb4G23739, Lb4G24043, Lb4G24253, Lb4G24543, Lb4G24773, Lb5G26722, Lb5G26822, Lb5G27140, Lb6G29635, Lb6G30380, Lb6G30854, Lb6G31511, Lb6G32395, Lb6G32618, Lb7G33165, Lb7G35351, Lb7G35516, Lb8G36114
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.