Basic Information
Locus ID:
Lb1G07890
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 496338769 | 496349583 | + | Lb1G07890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 99,710.84 Da | 40.95 | 73.78 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04434 | SWIM zinc finger | 677 | 705 | 3.2E-6 | IPR007527 |
| Pfam | PF10551 | MULE transposase domain | 465 | 521 | 1.2E-8 | IPR018289 |
| Pfam | PF03108 | MuDR family transposase | 264 | 325 | 1.1E-6 | IPR004332 |
| Pfam | PF04434 | SWIM zinc finger | 677 | 705 | 3.2E-6 | IPR007527 |
| Pfam | PF10551 | MULE transposase domain | 465 | 521 | 1.2E-8 | IPR018289 |
| Pfam | PF03108 | MuDR family transposase | 264 | 325 | 1.1E-6 | IPR004332 |
| SMART | SM00575 | 26again6 | 684 | 711 | 0.0013 | IPR006564 |
| SMART | SM00575 | 26again6 | 684 | 711 | 0.0013 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 677 | 709 | 9.754815 | IPR007527 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 677 | 709 | 9.754815 | IPR007527 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49920.1 | MuDR family transposase. | 0 |
| RefSeq | XP_020993195.2 | uncharacterized protein LOC107477299 [Arachis duranensis] | 0 |
| TrEMBL | A0A444XI18 | SWIM-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g096091 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||