Basic Information
Locus ID:
Lb1G07317
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
CRK1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 447612564 | 447615708 | + | Lb1G07317 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 61,758.95 Da | 53.95 | 85.22 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 144 | 361 | 2.05256E-116 | - |
| CDD | cd05117 | STKc_CAMK | 144 | 361 | 2.05256E-116 | - |
| Pfam | PF00069 | Protein kinase domain | 146 | 362 | 4.4E-64 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 146 | 362 | 4.4E-64 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 391 | 544 | 1.67E-16 | IPR011992 |
| SUPERFAMILY | SSF47473 | EF-hand | 391 | 544 | 1.67E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 143 | 395 | 3.64E-73 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 143 | 395 | 3.64E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 131 | 189 | 4.1E-15 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 386 | 544 | 1.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 190 | 385 | 1.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 131 | 189 | 4.1E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 190 | 385 | 1.8E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 386 | 544 | 1.4E-15 | - |
| SMART | SM00220 | serkin_6 | 101 | 362 | 1.0E-72 | IPR000719 |
| SMART | SM00220 | serkin_6 | 101 | 362 | 1.0E-72 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 404 | 439 | 8.376417 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 362 | 43.099525 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 404 | 439 | 8.376417 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 362 | 43.099525 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 224 | 236 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 224 | 236 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_030925938.1 | CDPK-related kinase 1-like isoform X4 [Quercus lobata] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9HQ73 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41696 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology