Basic Information
Locus ID:
Lb1G07138
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 437675846 | 437678674 | - | Lb1G07138 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 22,554.80 Da | 52.56 | 74.27 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 160 | 205 | 1.35111E-20 | - |
| CDD | cd14415 | UBA_NACA_NACP1 | 160 | 205 | 1.35111E-20 | - |
| Pfam | PF01849 | NAC domain | 68 | 123 | 2.6E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 166 | 205 | 9.8E-13 | IPR044034 |
| Pfam | PF19026 | HYPK UBA domain | 166 | 205 | 9.8E-13 | IPR044034 |
| Pfam | PF01849 | NAC domain | 68 | 123 | 2.6E-22 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 74 | 127 | 3.4E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 167 | 204 | 4.3E-20 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 74 | 127 | 3.4E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 167 | 204 | 4.3E-20 | - |
| SMART | SM01407 | NAC_2 | 68 | 124 | 3.4E-26 | IPR002715 |
| SMART | SM01407 | NAC_2 | 68 | 124 | 3.4E-26 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 31 | 206 | 2.8E-63 | IPR016641 |
| PIRSF | PIRSF015901 | NAC_alpha | 31 | 206 | 2.8E-63 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 65 | 130 | 17.762043 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 65 | 130 | 17.762043 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 170 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_039146496.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T3BRW5 | NAC-A/B domain-containing protein OS=Dendrobium nobile OX=94219 GN=KFK09_007457 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology