halophFGD

Basic Information

Locus ID: Lb1G06749

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: Protein of unknown function, DUF538

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr01	417379855	417381138	+	Lb1G06749

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.66	24,724.24 Da	41.09	89.29	-0.24

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04398	Protein of unknown function, DUF538	27	138	5.9E-29	IPR007493
Pfam	PF04398	Protein of unknown function, DUF538	27	138	5.9E-29	IPR007493
SUPERFAMILY	SSF141562	At5g01610-like	4	143	6.67E-34	IPR036758
SUPERFAMILY	SSF141562	At5g01610-like	4	143	6.67E-34	IPR036758
Gene3D	G3DSA:2.30.240.10	-	5	152	1.0E-31	IPR036758
Gene3D	G3DSA:2.30.240.10	-	5	152	1.0E-31	IPR036758

Best hit

Source	Best Hit ID	Description
TAIR	AT1G56580.1	Protein of unknown function, DUF538. Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number.
RefSeq	XP_021734487.1	uncharacterized protein LOC110701196 [Chenopodium quinoa]
TrEMBL	A0A803L4I0	DUF538 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	10	jg13371, jg1375, jg20751, jg22260, jg24949, jg25011, jg26502 ... jg27046, jg28271, jg38702
Aizoaceae	Mesembryanthemum crystallinum	3	gene_11823, gene_2764, gene_579
Amaranthaceae	Atriplex hortensis	3	Ah005340, Ah016505, Ah017181
Amaranthaceae	Beta vulgaris	3	BVRB_4g077350, BVRB_4g080100, BVRB_5g103970
Amaranthaceae	Salicornia bigelovii	10	Sbi_jg17564, Sbi_jg24130, Sbi_jg24131, Sbi_jg41212 ... Sbi_jg41213, Sbi_jg49762, Sbi_jg62213, Sbi_jg7969, Sbi_jg7970, Sbi_jg8123
Amaranthaceae	Salicornia europaea	5	Seu_jg11897, Seu_jg12066, Seu_jg12067, Seu_jg1456, Seu_jg817
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00007421, GOSA_00010726, GOSA_00010727, GOSA_00017147
Amaranthaceae	Suaeda glauca	8	Sgl24120, Sgl24121, Sgl29299, Sgl29300, Sgl46084, Sgl50784 ... Sgl52338, Sgl57630
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000004996, gene:ENSEOMG00000011060 ... gene:ENSEOMG00000011660, gene:ENSEOMG00000021815, gene:ENSEOMG00000026713, gene:ENSEOMG00000028252, gene:ENSEOMG00000032228, gene:ENSEOMG00000040225, gene:ENSEOMG00000045285
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.4AG0004580, CQ.Regalona.r1.4BG0004600 ... CQ.Regalona.r1.5BG0005350, CQ.Regalona.r1.8AG0006480, CQ.Regalona.r1.8AG0009260, CQ.Regalona.r1.8BG0006820
Anacardiaceae	Pistacia vera	10	pistato.v30069690, pistato.v30069700, pistato.v30069710 ... pistato.v30069720, pistato.v30069730, pistato.v30069740, pistato.v30080910, pistato.v30133420, pistato.v30232730, pistato.v30274140
Apiaceae	Apium graveolens	9	Ag11G04550, Ag11G04911, Ag11G04912, Ag6G02014, Ag6G02015 ... Ag6G02864, Ag8G00783, Ag8G00784, Ag9G01280
Arecaceae	Cocos nucifera	21	COCNU_01G000830, COCNU_02G002720, COCNU_03G013260 ... COCNU_05G003110, COCNU_05G003120, COCNU_05G003130, COCNU_05G003140, COCNU_05G003150, COCNU_05G003160, COCNU_05G003170, COCNU_05G003180, COCNU_06G002810, COCNU_07G006460, COCNU_08G000900, COCNU_10G004820, COCNU_12G003230, COCNU_12G003240, COCNU_13G006910, COCNU_13G006920, contig69312151G000010, scaffold001527G000030
Arecaceae	Phoenix dactylifera	19	gene-LOC103702331, gene-LOC103702989, gene-LOC103703026 ... gene-LOC103704580, gene-LOC103705299, gene-LOC103705300, gene-LOC103708464, gene-LOC103715769, gene-LOC103718575, gene-LOC103718576, gene-LOC103718577, gene-LOC103719312, gene-LOC103722061, gene-LOC103723209, gene-LOC103723212, gene-LOC120106815, gene-LOC120107490, gene-LOC120111074, gene-LOC120111233
Asparagaceae	Asparagus officinalis	12	AsparagusV1_01.2561.V1.1, AsparagusV1_07.1214.V1.1 ... AsparagusV1_07.1215.V1.1, AsparagusV1_08.1270.V1.1, AsparagusV1_08.1309.V1.1, AsparagusV1_08.1312.V1.1, AsparagusV1_08.1313.V1.1, AsparagusV1_08.1316.V1.1, AsparagusV1_08.1322.V1.1, AsparagusV1_08.1326.V1.1, AsparagusV1_08.1330.V1.1, AsparagusV1_08.36.V1.1
Asteraceae	Flaveria trinervia	11	Ftri14G22002, Ftri15G04576, Ftri15G16716, Ftri15G16880 ... Ftri15G34034, Ftri18G19140, Ftri1G26026, Ftri3G25032, Ftri4G05882, Ftri6G33051, Ftri8G06707
Brassicaceae	Arabidopsis thaliana	6	AT1G09310.1, AT1G30020.1, AT1G56580.1, AT4G24130.1 ... AT5G46230.1, AT5G49600.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10001064m.g.v1.0, Thhalv10001128m.g.v1.0 ... Thhalv10005030m.g.v1.0, Thhalv10008903m.g.v1.0, Thhalv10009038m.g.v1.0, Thhalv10023729m.g.v1.0, Thhalv10026459m.g.v1.0
Brassicaceae	Schrenkiella parvula	7	Sp1g07920.v2.2, Sp1g25900.v2.2, Sp2g06160.v2.2 ... Sp2g11090.v2.2, Sp2g11100.v2.2, Sp2g19910.v2.2, Sp7g22090.v2.2
Brassicaceae	Brassica nigra	13	BniB02g004650.2N, BniB02g063040.2N, BniB02g070420.2N ... BniB02g080980.2N, BniB03g003230.2N, BniB03g016350.2N, BniB04g005310.2N, BniB04g011100.2N, BniB04g015860.2N, BniB04g018790.2N, BniB04g030530.2N, BniB05g013090.2N, BniB07g045050.2N
Casuarinaceae	Casuarina glauca	1	Cgl09G1476
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno07g08200, gene.Cymno09g10100, gene.Cymno11g00030 ... gene.Cymno14g08750
Hydrocharitaceae	Thalassia testudinum	6	gene.Thate03g02520, gene.Thate05g14910, gene.Thate06g14880 ... gene.Thate06g14890, gene.Thate07g20460, gene.Thate08g18760
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-10241, nbisL1-mrna-5114, nbisL1-mrna-7534
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG03.2565, evm.TU.LG04.1715, evm.TU.LG10.1101 ... evm.TU.LG10.1605, evm.TU.LG11.1152, evm.TU.LG12.1095
Plantaginaceae	Plantago ovata	13	Pov_00005597, Pov_00006571, Pov_00006574, Pov_00006575 ... Pov_00006577, Pov_00006578, Pov_00006581, Pov_00007128, Pov_00013150, Pov_00032864, Pov_00033620, Pov_00038149, Pov_00038358
Plumbaginaceae	Limonium bicolor	8	Lb1G06749, Lb2G08195, Lb5G28730, Lb5G28731, Lb5G28732 ... Lb5G28738, Lb5G28739, Lb5G28741
Poaceae	Echinochloa crus-galli	47	AH01.1579, AH02.226, AH02.2554, AH03.3874, AH03.3875 ... AH03.3876, AH03.3877, AH03.530, AH03.531, AH03.532, AH03.533, AH04.2241, AH05.1313, AH05.3747, AH06.1910, AH07.1483, BH01.1775, BH02.233, BH02.2651, BH03.106, BH03.4161, BH03.4162, BH03.4163, BH03.637, BH03.638, BH03.639, BH03.640, BH04.2258, BH05.1485, BH05.3800, BH06.1755, CH02.260, CH02.3878, CH03.122, CH03.723, CH03.725, CH03.726, CH03.727, CH03.728, CH04.2644, CH05.1682, CH05.4001, CH06.1947, CH07.1270, CH07.1433, CH07.344, CH07.345
Poaceae	Eleusine coracana subsp. coracana	24	gene-QOZ80_1AG0002230, gene-QOZ80_1AG0006550 ... gene-QOZ80_1AG0026820, gene-QOZ80_1BG0050740, gene-QOZ80_1BG0055270, gene-QOZ80_1BG0077070, gene-QOZ80_2AG0113880, gene-QOZ80_2BG0167130, gene-QOZ80_5AG0362420, gene-QOZ80_5AG0394100, gene-QOZ80_5BG0410610, gene-QOZ80_6AG0542140, gene-QOZ80_6BG0495380, gene-QOZ80_7AG0552720, gene-QOZ80_7AG0552970, gene-QOZ80_7AG0553370, gene-QOZ80_7BG0583740, gene-QOZ80_7BG0584010, gene-QOZ80_7BG0584390, gene-QOZ80_7BG0610560, gene-QOZ80_8AG0617430, gene-QOZ80_8BG0645070, gene-QOZ80_9AG0692560, gene-QOZ80_9BG0718630
Poaceae	Hordeum vulgare	13	HORVU.MOREX.r3.1HG0050440.1.CDS1 ... HORVU.MOREX.r3.3HG0246070.1.CDS1, HORVU.MOREX.r3.3HG0246080.1.CDS1, HORVU.MOREX.r3.3HG0276350.1.CDS1, HORVU.MOREX.r3.4HG0359140.1.CDS1, HORVU.MOREX.r3.4HG0412780.1.CDS1, HORVU.MOREX.r3.5HG0443150.1.CDS1, HORVU.MOREX.r3.5HG0491080.1.CDS1, HORVU.MOREX.r3.5HG0491090.1.CDS1, HORVU.MOREX.r3.5HG0491100.1.CDS1, HORVU.MOREX.r3.5HG0491110.1.CDS1, HORVU.MOREX.r3.5HG0491120.1.CDS1, HORVU.MOREX.r3.7HG0709720.1.CDS1
Poaceae	Lolium multiflorum	9	gene-QYE76_001849, gene-QYE76_012126, gene-QYE76_031236 ... gene-QYE76_034050, gene-QYE76_051179, gene-QYE76_051180, gene-QYE76_054277, gene-QYE76_065553, gene-QYE76_066372
Poaceae	Oryza coarctata	12	Oco01G004900, Oco01G010010, Oco02G004900, Oco11G010500 ... Oco13G000690, Oco14G000740, Oco14G000760, Oco21G008020, Oco21G009860, Oco22G011130, Oco23G008540, Oco24G008130
Poaceae	Oryza sativa	17	LOC_Os01g11240.1, LOC_Os01g46390.1, LOC_Os05g49790.1 ... LOC_Os06g34790.1, LOC_Os07g02690.1, LOC_Os07g02700.1, LOC_Os07g02850.1, LOC_Os07g02870.1, LOC_Os07g02880.1, LOC_Os07g02900.1, LOC_Os07g02920.1, LOC_Os07g02940.1, LOC_Os10g37400.1, LOC_Os11g38210.1, LOC_Os11g38220.1, LOC_Os11g38240.1, LOC_Os12g37650.1
Poaceae	Paspalum vaginatum	21	gene-BS78_01G175700, gene-BS78_02G010900 ... gene-BS78_02G011000, gene-BS78_02G011100, gene-BS78_02G011200, gene-BS78_02G011400, gene-BS78_02G023600, gene-BS78_02G023700, gene-BS78_02G024200, gene-BS78_02G024300, gene-BS78_02G070000, gene-BS78_02G070100, gene-BS78_02G070200, gene-BS78_02G070300, gene-BS78_02G070400, gene-BS78_03G021100, gene-BS78_03G213900, gene-BS78_05G266000, gene-BS78_08G106400, gene-BS78_09G243300, gene-BS78_10G157100
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0205126, Pt_Chr0207459, Pt_Chr0400139, Pt_Chr0400159
Poaceae	Sporobolus alterniflorus	25	Chr02G014050, Chr02G025320, Chr02G028110, Chr02G028560 ... Chr03G002790, Chr03G012450, Chr05G003070, Chr05G005810, Chr05G006260, Chr05G019730, Chr06G017790, Chr06G029370, Chr07G013880, Chr08G002260, Chr08G004690, Chr09G002820, Chr10G015860, Chr15G020600, Chr18G016500, Chr19G009180, Chr24G013750, Chr26G000080, Chr27G007310, Chr29G003060, Chr31G008540
Poaceae	Thinopyrum elongatum	25	Tel1E01G322100, Tel3E01G254300, Tel3E01G254400 ... Tel3E01G400000, Tel3E01G909900, Tel3E01G910300, Tel3E01G910600, Tel3E01G910700, Tel4E01G226100, Tel4E01G571200, Tel5E01G171700, Tel5E01G428500, Tel5E01G428600, Tel5E01G428700, Tel5E01G428800, Tel5E01G428900, Tel5E01G429000, Tel5E01G429100, Tel5E01G429200, Tel5E01G429300, Tel5E01G429400, Tel5E01G429500, Tel5E01G429700, Tel5E01G429800, Tel7E01G573600
Poaceae	Triticum dicoccoides	35	gene_TRIDC1AG027570, gene_TRIDC1BG033400 ... gene_TRIDC3AG018180, gene_TRIDC3AG018190, gene_TRIDC3AG035330, gene_TRIDC3BG007040, gene_TRIDC3BG023890, gene_TRIDC3BG023900, gene_TRIDC3BG039650, gene_TRIDC3BG084670, gene_TRIDC3BG087520, gene_TRIDC3BG087610, gene_TRIDC4AG027640, gene_TRIDC4BG022800, gene_TRIDC4BG058640, gene_TRIDC5AG013290, gene_TRIDC5AG040570, gene_TRIDC5AG040580, gene_TRIDC5AG040590, gene_TRIDC5AG040610, gene_TRIDC5AG040620, gene_TRIDC5AG073710, gene_TRIDC5AG073720, gene_TRIDC5AG073730, gene_TRIDC5AG073740, gene_TRIDC5BG015370, gene_TRIDC5BG044170, gene_TRIDC5BG044230, gene_TRIDC5BG044240, gene_TRIDC5BG044250, gene_TRIDC5BG044260, gene_TRIDC5BG044270, gene_TRIDC5BG044280, gene_TRIDC7AG048330, gene_TRIDC7BG039050
Poaceae	Triticum aestivum	58	TraesCS1A02G181100.1.cds1, TraesCS1B02G199500.1.cds1 ... TraesCS1D02G184600.1.cds1, TraesCS3A02G132500.1.cds1, TraesCS3A02G132600.1.cds1, TraesCS3A02G236000.1.cds1, TraesCS3B02G053600.1, TraesCS3B02G167000.1.cds1, TraesCS3B02G263900.1.cds1, TraesCS3B02G554600.1.cds1, TraesCS3B02G554700.1.cds1, TraesCS3B02G579600.1.cds1, TraesCS3B02G586600.1.cds1, TraesCS3B02G586700.1.cds1, TraesCS3B02G594700.1.cds1, TraesCS3B02G605800.1.cds1, TraesCS3B02G606500.1.cds1, TraesCS3D02G148700.1.cds1, TraesCS3D02G148900.1.cds1, TraesCS3D02G236400.1.cds1, TraesCS4A02G171900.1.cds1, TraesCS4B02G349000.1.cds1, TraesCS4D02G143300.1.cds1, TraesCS4D02G343700.1.cds1, TraesCS5A02G086600.1, TraesCS5A02G267700.1, TraesCS5A02G267800.1.cds1, TraesCS5A02G267900.1.cds1, TraesCS5A02G268000.1.cds1, TraesCS5A02G517300.1.cds1, TraesCS5A02G517400.1.cds1, TraesCS5A02G517600.1.cds1, TraesCS5B02G092500.1.cds1, TraesCS5B02G266900.1.cds1, TraesCS5B02G267400.1, TraesCS5B02G267500.1.cds1, TraesCS5B02G267600.1.cds1, TraesCS5D02G100100.1.cds1, TraesCS5D02G275400.1, TraesCS5D02G275500.1.cds1, TraesCS5D02G275600.1.cds1, TraesCS5D02G275700.1.cds1, TraesCS7A02G346000.1.cds1, TraesCS7B02G237200.1.cds1, TraesCS7D02G333200.1.cds1, TraesCSU02G068000.1.cds1, TraesCSU02G074400.1, TraesCSU02G074600.1.cds1, TraesCSU02G148000.1.cds1, TraesCSU02G148100.1, TraesCSU02G148200.1, TraesCSU02G148300.1, TraesCSU02G148400.1.cds1, TraesCSU02G231300.1.cds1, TraesCSU02G231600.1, TraesCSU02G235000.1.cds1, TraesCSU02G240800.1.cds1, TraesCSU02G243200.1.cds1
Poaceae	Zea mays	16	Zm00001eb028590_P001, Zm00001eb043450_P001 ... Zm00001eb067840_P001, Zm00001eb067850_P001, Zm00001eb067860_P001, Zm00001eb067870_P001, Zm00001eb067880_P001, Zm00001eb136750_P001, Zm00001eb158180_P001, Zm00001eb165030_P001, Zm00001eb198880_P001, Zm00001eb277840_P001, Zm00001eb296500_P001, Zm00001eb298810_P001, Zm00001eb298820_P002, Zm00001eb338360_P001
Poaceae	Zoysia japonica	12	nbis-gene-10281, nbis-gene-19336, nbis-gene-238 ... nbis-gene-24798, nbis-gene-30339, nbis-gene-32338, nbis-gene-33122, nbis-gene-33123, nbis-gene-34410, nbis-gene-36106, nbis-gene-50439, nbis-gene-7188
Poaceae	Zoysia macrostachya	15	Zma_g12770, Zma_g15526, Zma_g19148, Zma_g25980, Zma_g28843 ... Zma_g30663, Zma_g32899, Zma_g5674, Zma_g5675, Zma_g5898, Zma_g6960, Zma_g7254, Zma_g7473, Zma_g9580, Zma_g9814
Portulacaceae	Portulaca oleracea	7	evm.TU.LG18.1071, evm.TU.LG18.1543, evm.TU.LG18.1544 ... evm.TU.LG20.337, evm.TU.LG20.338, evm.TU.LG20.801, evm.TU.LG25.575
Posidoniaceae	Posidonia oceanica	3	gene.Posoc04g00220, gene.Posoc04g23820, gene.Posoc06g12670
Rhizophoraceae	Bruguiera sexangula	7	evm.TU.Scaffold_13_RagTag.306, evm.TU.Scaffold_14_RagTag.37 ... evm.TU.Scaffold_14_RagTag.892, evm.TU.Scaffold_1_RagTag.51, evm.TU.Scaffold_2_RagTag.2116, evm.TU.Scaffold_3_RagTag.681, evm.TU.Scaffold_6_RagTag.1219
Rhizophoraceae	Carallia pectinifolia	9	nbisL1-mrna-1292, nbisL1-mrna-16658, nbisL1-mrna-18372 ... nbisL1-mrna-21030, nbisL1-mrna-24902, nbisL1-mrna-2867, nbisL1-mrna-2928, nbisL1-mrna-30783, nbisL1-mrna-8230
Rhizophoraceae	Ceriops tagal	7	nbisL1-mrna-11880, nbisL1-mrna-18338, nbisL1-mrna-1918 ... nbisL1-mrna-3783, nbisL1-mrna-7026, nbisL1-mrna-7789, nbisL1-mrna-9720
Rhizophoraceae	Ceriops zippeliana	7	nbisL1-mrna-1051, nbisL1-mrna-13638, nbisL1-mrna-17212 ... nbisL1-mrna-19135, nbisL1-mrna-5142, nbisL1-mrna-6365, nbisL1-mrna-8682
Rhizophoraceae	Kandelia candel	7	add.evm.TU.utg000003l.265, add.evm.TU.utg000007l.185 ... add.evm.TU.utg000009l.4, add.evm.TU.utg000011l.289, add.evm.TU.utg000012l.15, add.evm.TU.utg000022l.58, add.evm.TU.utg000025l.38
Rhizophoraceae	Kandelia obovata	2	Maker00005420, Maker00011237
Rhizophoraceae	Rhizophora apiculata	8	nbisL1-mrna-17253, nbisL1-mrna-18829, nbisL1-mrna-19925 ... nbisL1-mrna-20199, nbisL1-mrna-21992, nbisL1-mrna-22222, nbisL1-mrna-23183, nbisL1-mrna-23185
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-11056, nbisL1-mrna-13114, nbisL1-mrna-16104 ... nbisL1-mrna-4028, nbisL1-mrna-44, nbisL1-mrna-4915, nbisL1-mrna-9114
Salicaceae	Populus euphratica	10	populus_peu03758, populus_peu09686, populus_peu09871 ... populus_peu09945, populus_peu13198, populus_peu13262, populus_peu15593, populus_peu20773, populus_peu24835, populus_peu34604
Solanaceae	Lycium barbarum	9	gene-LOC132598464, gene-LOC132599479, gene-LOC132608786 ... gene-LOC132611332, gene-LOC132615308, gene-LOC132620225, gene-LOC132623218, gene-LOC132624534, gene-LOC132638839
Solanaceae	Solanum chilense	9	SOLCI001661900, SOLCI002358600, SOLCI003084800 ... SOLCI003437300, SOLCI003973700, SOLCI003973800, SOLCI004213800, SOLCI005880800, SOLCI007180900
Solanaceae	Solanum pennellii	10	gene-LOC107008822, gene-LOC107010239, gene-LOC107010476 ... gene-LOC107010586, gene-LOC107010728, gene-LOC107010847, gene-LOC107015489, gene-LOC107027084, gene-LOC107028111, gene-LOC107028332
Tamaricaceae	Reaumuria soongarica	5	STRG.19940_chr07_-, STRG.27774_chr04_-, STRG.28398_chr04_- ... gene_13547, gene_5957
Tamaricaceae	Tamarix chinensis	4	TC01G4233, TC02G2255, TC02G3559, TC06G2663
Zosteraceae	Zostera marina	6	Zosma01g31620.v3.1, Zosma03g26140.v3.1, Zosma03g29480.v3.1 ... Zosma04g21630.v3.1, Zosma05g33310.v3.1, Zosma06g03930.v3.1