Basic Information
Locus ID:
Lb1G06445
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 404687828 | 404689903 | - | Lb1G06445 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 54,272.50 Da | 37.92 | 94.60 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 78 | 153 | 2.93203E-12 | - |
| CDD | cd00121 | MATH | 351 | 468 | 0.0032546 | IPR002083 |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 78 | 153 | 2.93203E-12 | - |
| CDD | cd00121 | MATH | 351 | 468 | 0.0032546 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 78 | 166 | 2.2E-13 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 78 | 166 | 2.2E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 190 | 285 | 3.1E-9 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 190 | 285 | 3.1E-9 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 79 | 167 | 2.43E-12 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 351 | 470 | 6.54E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 79 | 167 | 2.43E-12 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 351 | 470 | 6.54E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 169 | 7.5E-16 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 204 | 306 | 1.8E-10 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 204 | 306 | 1.8E-10 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 169 | 7.5E-16 | IPR011333 |
| SMART | SM00875 | BACK_2 | 179 | 286 | 3.4E-5 | IPR011705 |
| SMART | SM00225 | BTB_4 | 32 | 170 | 1.7E-6 | IPR000210 |
| SMART | SM00875 | BACK_2 | 179 | 286 | 3.4E-5 | IPR011705 |
| SMART | SM00225 | BTB_4 | 32 | 170 | 1.7E-6 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 78 | 138 | 9.682221 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 78 | 138 | 9.682221 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_021838558.1 | BTB/POZ domain-containing protein POB1-like [Spinacia oleracea] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B6ZIG8 | Putative BTB/POZ domain-containing protein POB1-like OS=Davidia involucrata OX=16924 GN=Din_013678 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||