Basic Information
Locus ID:
Lb1G06444
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 404651623 | 404653818 | - | Lb1G06444 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 54,884.32 Da | 37.51 | 91.53 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 352 | 469 | 0.00298581 | IPR002083 |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 79 | 154 | 1.98312E-12 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 79 | 154 | 1.98312E-12 | - |
| CDD | cd00121 | MATH | 352 | 469 | 0.00298581 | IPR002083 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 192 | 285 | 1.1E-9 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 192 | 285 | 1.1E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 79 | 167 | 2.5E-13 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 79 | 167 | 2.5E-13 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 80 | 168 | 3.69E-12 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 352 | 472 | 2.94E-5 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 352 | 472 | 2.94E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 80 | 168 | 3.69E-12 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 206 | 306 | 2.1E-10 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 24 | 170 | 1.2E-15 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 343 | 472 | 2.6E-6 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 343 | 472 | 2.6E-6 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 24 | 170 | 1.2E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 206 | 306 | 2.1E-10 | - |
| SMART | SM00225 | BTB_4 | 32 | 171 | 8.3E-6 | IPR000210 |
| SMART | SM00875 | BACK_2 | 183 | 287 | 6.5E-4 | IPR011705 |
| SMART | SM00875 | BACK_2 | 183 | 287 | 6.5E-4 | IPR011705 |
| SMART | SM00225 | BTB_4 | 32 | 171 | 8.3E-6 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 79 | 139 | 10.17859 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 79 | 139 | 10.17859 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_031377581.1 | BTB/POZ domain-containing protein POB1-like isoform X2 [Punica granatum] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B6ZJX8 | Putative BTB/POZ domain-containing protein POB1-like OS=Davidia involucrata OX=16924 GN=Din_013676 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||