Basic Information
Locus ID:
Lb1G06443
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 404636425 | 404638194 | - | Lb1G06443 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 43,589.45 Da | 35.71 | 92.82 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 252 | 369 | 0.00258968 | IPR002083 |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 15 | 90 | 2.23639E-12 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 15 | 90 | 2.23639E-12 | - |
| CDD | cd00121 | MATH | 252 | 369 | 0.00258968 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 15 | 104 | 7.1E-13 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 15 | 104 | 7.1E-13 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 252 | 372 | 2.81E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 103 | 8.63E-11 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 103 | 8.63E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 252 | 372 | 2.81E-5 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 243 | 376 | 4.6E-5 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 105 | 1.1E-14 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 106 | 206 | 2.3E-10 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 106 | 206 | 2.3E-10 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 243 | 376 | 4.6E-5 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 105 | 1.1E-14 | IPR011333 |
| SMART | SM00875 | BACK_2 | 80 | 187 | 4.3E-8 | IPR011705 |
| SMART | SM00875 | BACK_2 | 80 | 187 | 4.3E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 12 | 107 | 1.0E-4 | IPR000210 |
| SMART | SM00225 | BTB_4 | 12 | 107 | 1.0E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 75 | 9.847677 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 75 | 9.847677 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_021838558.1 | BTB/POZ domain-containing protein POB1-like [Spinacia oleracea] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8S0PAC8 | BTB POZ domain-containing POB1-like OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A107103 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||