Basic Information
Locus ID:
Lb1G06441
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 404603954 | 404606084 | - | Lb1G06441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 53,890.39 Da | 35.30 | 91.61 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 69 | 144 | 2.33571E-11 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 69 | 144 | 2.33571E-11 | - |
| Pfam | PF00651 | BTB/POZ domain | 69 | 157 | 1.5E-11 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 178 | 275 | 5.8E-7 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 178 | 275 | 5.8E-7 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 69 | 157 | 1.5E-11 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 71 | 158 | 4.79E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 342 | 463 | 6.15E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 71 | 158 | 4.79E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 342 | 463 | 6.15E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 2 | 160 | 1.3E-14 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 190 | 299 | 2.5E-8 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 190 | 299 | 2.5E-8 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 2 | 160 | 1.3E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 25 | 161 | 2.8E-6 | IPR000210 |
| SMART | SM00225 | BTB_4 | 25 | 161 | 2.8E-6 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 77 | 124 | 8.772214 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 77 | 124 | 8.772214 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_024449613.1 | BTB/POZ domain-containing protein POB1 isoform X2 [Populus trichocarpa] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B6ZJX8 | Putative BTB/POZ domain-containing protein POB1-like OS=Davidia involucrata OX=16924 GN=Din_013676 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||