Basic Information
Locus ID:
Lb1G06419
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 404039095 | 404040877 | + | Lb1G06419 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 47,295.10 Da | 33.40 | 98.86 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 15 | 90 | 5.55394E-12 | - |
| CDD | cd00121 | MATH | 288 | 405 | 0.00333348 | IPR002083 |
| CDD | cd00121 | MATH | 288 | 405 | 0.00333348 | IPR002083 |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 15 | 90 | 5.55394E-12 | - |
| Pfam | PF00651 | BTB/POZ domain | 15 | 104 | 1.4E-12 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 128 | 221 | 1.4E-8 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 15 | 104 | 1.4E-12 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 128 | 221 | 1.4E-8 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 288 | 408 | 1.37E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 104 | 1.49E-11 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 104 | 1.49E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 288 | 408 | 1.37E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 106 | 6.1E-15 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 278 | 408 | 4.7E-6 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 106 | 6.1E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 141 | 244 | 9.7E-10 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 278 | 408 | 4.7E-6 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 141 | 244 | 9.7E-10 | - |
| SMART | SM00225 | BTB_4 | 12 | 107 | 1.0E-4 | IPR000210 |
| SMART | SM00875 | BACK_2 | 122 | 223 | 0.0063 | IPR011705 |
| SMART | SM00225 | BTB_4 | 12 | 107 | 1.0E-4 | IPR000210 |
| SMART | SM00875 | BACK_2 | 122 | 223 | 0.0063 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 75 | 9.661539 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 75 | 9.661539 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_021838558.1 | BTB/POZ domain-containing protein POB1-like [Spinacia oleracea] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B6ZLL0 | Putative BTB/POZ domain-containing protein POB1-like OS=Davidia involucrata OX=16924 GN=Din_013677 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||