Basic Information
Locus ID:
Lb1G05963
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 388959181 | 388961344 | - | Lb1G05963 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 27,786.78 Da | 51.56 | 73.11 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 98 | 161 | 2.0E-10 | IPR004252 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 98 | 161 | 2.0E-10 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 60 | - | - |
| Coils | Coil | Coil | 82 | 105 | - | - |
| Coils | Coil | Coil | 82 | 105 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039134219.1 | uncharacterized protein LOC120271605 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A445EYV0 | Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_055151 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||