Basic Information
Locus ID:
Lb1G05910
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 387325786 | 387328444 | - | Lb1G05910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 34,746.25 Da | 49.05 | 69.46 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 153 | 290 | 7.3E-28 | IPR006571 |
| Pfam | PF07534 | TLD | 153 | 290 | 7.3E-28 | IPR006571 |
| SMART | SM00584 | 109ultra | 127 | 291 | 8.9E-34 | IPR006571 |
| SMART | SM00584 | 109ultra | 127 | 291 | 8.9E-34 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 128 | 291 | 23.779026 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 128 | 291 | 23.779026 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 76 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39870.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_022136824.1 | TLD domain-containing protein 2 [Momordica charantia] | 0 |
| A8KBE0 | Oxidation resistance protein 1 OS=Xenopus tropicalis OX=8364 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J1C5F6 | TLD domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111008430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology