Basic Information
Locus ID:
Lb1G05860
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 385904206 | 385905298 | + | Lb1G05860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 39,331.66 Da | 42.77 | 72.40 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 81 | 135 | 2.08042E-7 | IPR001623 |
| CDD | cd06257 | DnaJ | 81 | 135 | 2.08042E-7 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 81 | 143 | 3.4E-9 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 81 | 143 | 3.4E-9 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 72 | 146 | 5.36E-12 | IPR036869 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 72 | 146 | 5.36E-12 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 67 | 164 | 3.5E-11 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 67 | 164 | 3.5E-11 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 80 | 138 | 3.7E-5 | IPR001623 |
| SMART | SM00271 | dnaj_3 | 80 | 138 | 3.7E-5 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 81 | 146 | 11.107133 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 81 | 146 | 11.107133 | IPR001623 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021728170.1 | uncharacterized protein LOC110695236 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803KX97 | J domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology