Basic Information
Locus ID:
Lb1G05824
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 384371047 | 384376209 | - | Lb1G05824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 70,130.72 Da | 50.83 | 82.34 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 162 | 424 | 2.98077E-131 | - |
| CDD | cd05117 | STKc_CAMK | 162 | 424 | 2.98077E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 163 | 425 | 1.4E-70 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 163 | 425 | 1.4E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 473 | 1.62E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 456 | 616 | 2.67E-18 | IPR011992 |
| SUPERFAMILY | SSF47473 | EF-hand | 456 | 616 | 2.67E-18 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 473 | 1.62E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 156 | 252 | 3.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 253 | 446 | 1.9E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 447 | 617 | 9.6E-20 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 447 | 617 | 9.6E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 156 | 252 | 3.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 253 | 446 | 1.9E-61 | - |
| SMART | SM00220 | serkin_6 | 163 | 425 | 6.9E-98 | IPR000719 |
| SMART | SM00220 | serkin_6 | 163 | 425 | 6.9E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 163 | 425 | 51.396183 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 544 | 579 | 8.906429 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 544 | 579 | 8.906429 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 163 | 425 | 51.396183 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 169 | 195 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 287 | 299 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 287 | 299 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 169 | 195 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 55 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_007047191.1 | PREDICTED: CDPK-related kinase 5 [Theobroma cacao] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B7CEX1 | Putative CDPK-related kinase 5 OS=Davidia involucrata OX=16924 GN=Din_048435 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology