Basic Information
Locus ID:
Lb1G05597
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 376507334 | 376508887 | + | Lb1G05597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 38,083.76 Da | 48.95 | 75.25 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 216 | 337 | 1.5E-17 | IPR004252 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 216 | 337 | 1.5E-17 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 59 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039134219.1 | uncharacterized protein LOC120271605 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A2K3L4U5 | Transposase, Ptta/En/Spm, plant OS=Trifolium pratense OX=57577 GN=L195_g029441 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||