Basic Information
Locus ID:
Lb1G05510
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 373126290 | 373131016 | + | Lb1G05510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 50,444.54 Da | 41.84 | 88.94 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14132 | STKc_CK2_alpha | 115 | 419 | 0.0 | - |
| CDD | cd14132 | STKc_CK2_alpha | 115 | 419 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 134 | 419 | 7.5E-65 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 134 | 419 | 7.5E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 422 | 1.05E-76 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 422 | 1.05E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 134 | 210 | 9.5E-117 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 211 | 419 | 9.5E-117 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 134 | 210 | 9.5E-117 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 211 | 419 | 9.5E-117 | - |
| SMART | SM00220 | serkin_6 | 134 | 419 | 2.8E-74 | IPR000719 |
| SMART | SM00220 | serkin_6 | 134 | 419 | 2.8E-74 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 134 | 419 | 42.887516 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 134 | 419 | 42.887516 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 140 | 163 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 140 | 163 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50000.1 | casein kinase II, alpha chain 2. casein kinase II catalytic subunit alpha | 0 |
| RefSeq | XP_018807670.1 | casein kinase II subunit alpha-2 [Juglans regia] | 0 |
| Q9AR27 | Casein kinase II subunit alpha-2 OS=Oryza sativa subsp. indica OX=39946 GN=HD6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J5BNZ2 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_019732 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology