Basic Information
Locus ID:
Lb1G05483
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 372108075 | 372111527 | + | Lb1G05483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 76,715.99 Da | 46.94 | 90.31 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 400 | 616 | 6.6E-40 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 400 | 616 | 6.6E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 654 | 1.09E-61 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 654 | 1.09E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 400 | 465 | 3.2E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 466 | 672 | 2.5E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 400 | 465 | 3.2E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 466 | 672 | 2.5E-48 | - |
| SMART | SM00220 | serkin_6 | 400 | 658 | 2.2E-24 | IPR000719 |
| SMART | SM00220 | serkin_6 | 400 | 658 | 2.2E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 392 | 658 | 32.527294 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 392 | 658 | 32.527294 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 510 | 522 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 510 | 522 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 395 | - | - |
| Coils | Coil | Coil | 263 | 283 | - | - |
| Coils | Coil | Coil | 263 | 283 | - | - |
| Coils | Coil | Coil | 319 | 346 | - | - |
| Coils | Coil | Coil | 319 | 346 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_004492744.1 | U-box domain-containing protein 33 isoform X2 [Cicer arietinum] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803M2X4 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology