Basic Information
Locus ID:
Lb1G05354
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Cation efflux family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 367931237 | 367933918 | - | Lb1G05354 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 49,479.80 Da | 50.72 | 89.69 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 358 | 433 | 9.1E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 186 | 344 | 3.7E-26 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 358 | 433 | 9.1E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 186 | 344 | 3.7E-26 | IPR002524 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 356 | 433 | 9.42E-17 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 177 | 341 | 9.02E-33 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 356 | 433 | 9.42E-17 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 177 | 341 | 9.02E-33 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 356 | 434 | 7.2E-17 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 181 | 354 | 1.3E-33 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 181 | 354 | 1.3E-33 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 356 | 434 | 7.2E-17 | IPR036837 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79520.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_009763110.1 | PREDICTED: metal tolerance protein 9-like [Nicotiana sylvestris] | 0 |
| Q9SAJ7 | Metal tolerance protein 9 OS=Arabidopsis thaliana OX=3702 GN=MTP9 PE=3 SV=2 | 0 | |
| TrEMBL | A0A1U7VML5 | metal tolerance protein 9-like OS=Nicotiana sylvestris OX=4096 GN=LOC104215062 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology