Basic Information
Locus ID:
Lb1G05350
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 367893948 | 367897260 | - | Lb1G05350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 53,349.20 Da | 48.36 | 92.66 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 195 | 384 | 2.2E-32 | IPR002524 |
| Pfam | PF01545 | Cation efflux family | 195 | 384 | 2.2E-32 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 390 | 465 | 1.0E-12 | IPR027470 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 390 | 465 | 1.0E-12 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 388 | 465 | 1.06E-16 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 186 | 386 | 3.01E-42 | IPR027469 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 186 | 386 | 3.01E-42 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 388 | 465 | 1.06E-16 | IPR036837 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 389 | 466 | 8.3E-17 | IPR036837 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 389 | 466 | 8.3E-17 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 190 | 384 | 1.5E-43 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 190 | 384 | 1.5E-43 | IPR027469 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 192 | 465 | 7.2E-33 | IPR002524 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 192 | 465 | 7.2E-33 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79520.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_021749990.1 | metal tolerance protein 10-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9SAJ7 | Metal tolerance protein 9 OS=Arabidopsis thaliana OX=3702 GN=MTP9 PE=3 SV=2 | 0 | |
| TrEMBL | A0A1U7VML5 | metal tolerance protein 9-like OS=Nicotiana sylvestris OX=4096 GN=LOC104215062 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology