Basic Information
Locus ID:
Lb1G05346
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 367860249 | 367869102 | + | Lb1G05346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 136,245.69 Da | 44.03 | 73.14 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 954 | 1211 | 8.51624E-113 | - |
| CDD | cd06410 | PB1_UP2 | 180 | 276 | 2.06663E-43 | - |
| CDD | cd13999 | STKc_MAP3K-like | 954 | 1211 | 8.51624E-113 | - |
| CDD | cd06410 | PB1_UP2 | 180 | 276 | 2.06663E-43 | - |
| Pfam | PF00564 | PB1 domain | 193 | 276 | 3.3E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 950 | 1211 | 1.3E-62 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 950 | 1211 | 1.3E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 193 | 276 | 3.3E-20 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 934 | 1210 | 1.66E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 193 | 280 | 7.01E-22 | - |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 193 | 280 | 7.01E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 934 | 1210 | 1.66E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 941 | 1035 | 1.8E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 941 | 1035 | 1.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1036 | 1222 | 2.3E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 195 | 279 | 1.3E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1036 | 1222 | 2.3E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 195 | 279 | 1.3E-12 | - |
| SMART | SM00220 | serkin_6 | 948 | 1215 | 3.8E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 191 | 278 | 4.6E-29 | IPR000270 |
| SMART | SM00220 | serkin_6 | 948 | 1215 | 3.8E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 191 | 278 | 4.6E-29 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 948 | 1214 | 40.96529 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 948 | 1214 | 40.96529 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1073 | 1085 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 954 | 975 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1073 | 1085 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 954 | 975 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1138 | 1160 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1067 | 1085 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1182 | 1204 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1030 | 1043 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1067 | 1085 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1030 | 1043 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1182 | 1204 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1138 | 1160 | 2.3E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 617 | - | - |
| Coils | Coil | Coil | 652 | 672 | - | - |
| Coils | Coil | Coil | 652 | 672 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_010693405.1 | uncharacterized protein LOC104906362 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BBL6 | Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_034274 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology