Basic Information
Locus ID:
Lb1G05329
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 367521103 | 367525136 | + | Lb1G05329 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 66,351.87 Da | 64.31 | 69.95 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 145 | - | - |
| Coils | Coil | Coil | 509 | 529 | - | - |
| Coils | Coil | Coil | 509 | 529 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.2 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_017984995.1 | PREDICTED: uncharacterized protein LOC18586548 [Theobroma cacao] | 0 |
| TrEMBL | A0A061FPQ4 | RING/U-box superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_043382 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology