Basic Information
Locus ID:
Lb1G05195
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 363403836 | 363407332 | + | Lb1G05195 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 115,565.59 Da | 40.31 | 97.44 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 145 | 167 | 0.64 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 577 | 597 | 0.32 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 289 | 326 | 2.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 289 | 326 | 2.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 217 | 277 | 4.8E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 701 | 985 | 3.5E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 63 | 2.5E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 95 | 117 | 0.26 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 701 | 985 | 3.5E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 217 | 277 | 4.8E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 95 | 117 | 0.26 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 63 | 2.5E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 577 | 597 | 0.32 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 145 | 167 | 0.64 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 307 | 610 | 2.2E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 987 | 1.05E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 307 | 610 | 2.2E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 379 | 8.5E-60 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 379 | 8.5E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 987 | 1.05E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 209 | 2.8E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 683 | 775 | 1.8E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 456 | 646 | 4.6E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 456 | 646 | 4.6E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 1000 | 1.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 455 | 4.1E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 209 | 2.8E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 683 | 775 | 1.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 1000 | 1.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 455 | 4.1E-69 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 503 | 527 | 68.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 699 | 994 | 1.7E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 191 | 216 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 4.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 503 | 527 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 216 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 699 | 994 | 1.7E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 4.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 52.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 576 | 598 | 7.1113 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 994 | 37.191513 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 994 | 37.191513 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 576 | 598 | 7.1113 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 729 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 729 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1022 | 1041 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1022 | 1041 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021804160.1 | receptor-like protein kinase HSL1, partial [Prunus avium] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4D5T8 | Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006771 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology