Basic Information
Locus ID:
Lb1G05181
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 363054983 | 363064808 | - | Lb1G05181 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 194,581.58 Da | 42.49 | 75.72 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 1341 | 1436 | 5.92513E-11 | - |
| CDD | cd14016 | STKc_CK1 | 165 | 439 | 2.48653E-115 | - |
| CDD | cd00303 | retropepsin_like | 1341 | 1436 | 5.92513E-11 | - |
| CDD | cd14016 | STKc_CK1 | 165 | 439 | 2.48653E-115 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 1006 | 1076 | 3.2E-8 | IPR005162 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1645 | 1738 | 3.6E-17 | IPR041577 |
| Pfam | PF00069 | Protein kinase domain | 165 | 397 | 2.0E-14 | IPR000719 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1645 | 1738 | 3.6E-17 | IPR041577 |
| Pfam | PF03732 | Retrotransposon gag protein | 1006 | 1076 | 3.2E-8 | IPR005162 |
| Pfam | PF00069 | Protein kinase domain | 165 | 397 | 2.0E-14 | IPR000719 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1527 | 1738 | 8.67E-53 | IPR043502 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1527 | 1738 | 8.67E-53 | IPR043502 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 164 | 447 | 1.78E-56 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 164 | 447 | 1.78E-56 | IPR011009 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1332 | 1455 | 8.5E-11 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 1514 | 1589 | 8.1E-17 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1592 | 1673 | 1.4E-13 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1332 | 1455 | 8.5E-11 | IPR021109 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 479 | 3.2E-78 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 1592 | 1673 | 1.4E-13 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1514 | 1589 | 8.1E-17 | IPR043128 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 479 | 3.2E-78 | - |
| SMART | SM00220 | serkin_6 | 165 | 462 | 5.5E-10 | IPR000719 |
| SMART | SM00220 | serkin_6 | 165 | 462 | 5.5E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 165 | 449 | 22.845503 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 165 | 449 | 22.845503 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 291 | 303 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 171 | 203 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 171 | 203 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 291 | 303 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 943 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 943 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 943 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1227 | 1268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1227 | 1241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 943 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1227 | 1241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1227 | 1268 | - | - |
| Coils | Coil | Coil | 1215 | 1252 | - | - |
| Coils | Coil | Coil | 1215 | 1252 | - | - |
| Coils | Coil | Coil | 1101 | 1121 | - | - |
| Coils | Coil | Coil | 1101 | 1121 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021739126.1 | casein kinase 1-like protein HD16 [Chenopodium quinoa] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZN90 | casein kinase 1-like protein HD16 isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104592067 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology