Basic Information
Locus ID:
Lb1G05171
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 362681162 | 362684477 | - | Lb1G05171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 108,016.70 Da | 42.24 | 96.65 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 278 | 317 | 1.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 692 | 885 | 6.0E-35 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 63 | 2.3E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 145 | 167 | 0.59 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 568 | 588 | 0.29 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 278 | 317 | 1.7E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 95 | 117 | 0.24 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 63 | 2.3E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 692 | 885 | 6.0E-35 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 95 | 117 | 0.24 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 145 | 167 | 0.59 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 568 | 588 | 0.29 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 570 | 1.02E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 955 | 3.51E-58 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 570 | 1.02E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 955 | 3.51E-58 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 449 | 638 | 4.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 448 | 3.8E-51 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 449 | 638 | 4.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 142 | 1.3E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 674 | 958 | 3.3E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 245 | 7.9E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 674 | 958 | 3.3E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 142 | 1.3E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 448 | 3.8E-51 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 245 | 7.9E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 280 | 303 | 24.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 960 | 3.2E-13 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 494 | 518 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 424 | 448 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 304 | 328 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 424 | 448 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 542 | 566 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 216 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 216 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 960 | 3.2E-13 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 542 | 566 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 304 | 328 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 280 | 303 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 494 | 518 | 68.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 567 | 589 | 7.1113 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 960 | 29.234072 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 960 | 29.234072 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 567 | 589 | 7.1113 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 720 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 828 | 840 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 720 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 828 | 840 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_048495701.1 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5RH33 | receptor-like protein kinase HSL1 OS=Prunus avium OX=42229 GN=LOC110748493 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology