Basic Information
Locus ID:
Lb1G05003
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 357224711 | 357229248 | + | Lb1G05003 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.88 | 42,184.09 Da | 48.33 | 57.99 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 175 | 258 | 5.0E-24 | IPR027329 |
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 175 | 258 | 5.0E-24 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 389 | - | - |
| Coils | Coil | Coil | 182 | 216 | - | - |
| Coils | Coil | Coil | 182 | 216 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021848711.1 | protein WVD2-like 5 isoform X4 [Spinacia oleracea] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RF06 | TPX2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology