halophFGD

Basic Information

Locus ID: Lb1G04989

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr01	356831471	356837865	-	Lb1G04989

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.41	172,745.84 Da	40.60	80.68	-0.49

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02992	Transposase family tnp2	216	301	8.0E-19	IPR004242
Pfam	PF13960	Domain of unknown function (DUF4218)	476	588	2.0E-42	IPR025452
Pfam	PF13952	Domain of unknown function (DUF4216)	732	779	9.1E-9	IPR025312
Pfam	PF13963	Transposase-associated domain	7	72	2.1E-15	IPR029480
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1393	1494	2.3E-5	IPR003653
Pfam	PF13952	Domain of unknown function (DUF4216)	732	779	9.1E-9	IPR025312
Pfam	PF02992	Transposase family tnp2	216	301	8.0E-19	IPR004242
Pfam	PF13960	Domain of unknown function (DUF4218)	476	588	2.0E-42	IPR025452
Pfam	PF13963	Transposase-associated domain	7	72	2.1E-15	IPR029480
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1393	1494	2.3E-5	IPR003653
SUPERFAMILY	SSF54001	Cysteine proteinases	1368	1488	8.05E-18	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1368	1488	8.05E-18	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1352	1502	1.8E-14	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1352	1502	1.8E-14	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1379	1506	9.820688	IPR003653
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1379	1506	9.820688	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	829	863	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	829	863	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1168	1187	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1168	1187	-	-
Coils	Coil	Coil	1061	1084	-	-
Coils	Coil	Coil	1061	1084	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_017218610.1	PREDICTED: uncharacterized protein LOC108196049 isoform X1 [Daucus carota subsp. sativus]	0
TrEMBL	A0A445LEM3	Transposase (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_007717 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047