Basic Information
Locus ID:
Lb1G04944
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 355088358 | 355092666 | + | Lb1G04944 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 30,275.42 Da | 39.21 | 84.30 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 228 | 8.16E-12 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 218 | 265 | 4.33E-8 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 228 | 8.16E-12 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 218 | 265 | 4.33E-8 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 226 | 266 | 4.5E-8 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 41 | 225 | 1.7E-5 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 41 | 225 | 1.7E-5 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 226 | 266 | 4.5E-8 | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 139 | 171 | - | - |
| Coils | Coil | Coil | 139 | 171 | - | - |
| Coils | Coil | Coil | 176 | 203 | - | - |
| Coils | Coil | Coil | 176 | 203 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.3 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_027355528.1 | SH3 domain-containing protein 2 isoform X3 [Abrus precatorius] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8LJJ6 | SH3 domain-containing protein 2 isoform X3 OS=Abrus precatorius OX=3816 GN=LOC113865280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology