Basic Information
Locus ID:
Lb1G04909
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Thioredoxin-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 354222245 | 354225546 | + | Lb1G04909 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 93,011.55 Da | 47.48 | 73.03 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 179 | 5.56066E-54 | - |
| CDD | cd14066 | STKc_IRAK | 558 | 818 | 5.40601E-89 | - |
| CDD | cd01989 | STK_N | 17 | 179 | 5.56066E-54 | - |
| CDD | cd14066 | STKc_IRAK | 558 | 818 | 5.40601E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 554 | 787 | 4.0E-39 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 554 | 787 | 4.0E-39 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 18 | 165 | 1.5E-12 | IPR006016 |
| Pfam | PF00582 | Universal stress protein family | 18 | 165 | 1.5E-12 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 168 | 3.85E-13 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 168 | 3.85E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 535 | 811 | 4.18E-67 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 535 | 811 | 4.18E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 532 | 624 | 1.7E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 165 | 4.5E-13 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 625 | 831 | 7.8E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 625 | 831 | 7.8E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 165 | 4.5E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 532 | 624 | 1.7E-25 | - |
| SMART | SM00220 | serkin_6 | 552 | 821 | 4.4E-26 | IPR000719 |
| SMART | SM00220 | serkin_6 | 552 | 821 | 4.4E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 552 | 815 | 35.69331 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 552 | 815 | 35.69331 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 670 | 682 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 670 | 682 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 242 | - | - |
| Coils | Coil | Coil | 389 | 409 | - | - |
| Coils | Coil | Coil | 389 | 409 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_019054017.1 | PREDICTED: U-box domain-containing protein 35-like [Nelumbo nucifera] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8Q5Z6 | U-box domain-containing protein 35-like OS=Nelumbo nucifera OX=4432 GN=LOC104601706 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology