Basic Information
Locus ID:
Lb1G04869
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 352417522 | 352421520 | - | Lb1G04869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 104,519.17 Da | 41.15 | 89.46 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 622 | 895 | 4.7149E-99 | - |
| CDD | cd14066 | STKc_IRAK | 622 | 895 | 4.7149E-99 | - |
| Pfam | PF13855 | Leucine rich repeat | 98 | 155 | 3.9E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 375 | 0.0076 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 68 | 0.051 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 428 | 448 | 1.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 68 | 0.051 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 617 | 890 | 1.8E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 375 | 0.0076 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 155 | 3.9E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 428 | 448 | 1.6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 617 | 890 | 1.8E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 450 | 1.93E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 909 | 8.7E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 450 | 1.93E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 909 | 8.7E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 910 | 1.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 338 | 464 | 9.6E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 577 | 693 | 3.0E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 577 | 693 | 3.0E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 338 | 464 | 9.6E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 332 | 1.1E-74 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 910 | 1.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 332 | 1.1E-74 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 143 | 167 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 425 | 448 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 167 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 400 | 424 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 2.6E-4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 616 | 896 | 3.3E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 425 | 448 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 118 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 400 | 424 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 616 | 896 | 3.3E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 96 | 118 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 2.6E-4 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 142 | 7.1113 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 142 | 7.1113 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 616 | 896 | 39.947643 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 616 | 896 | 39.947643 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 622 | 644 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 622 | 644 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 492 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_028092959.1 | receptor protein kinase TMK1-like [Camellia sinensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R6RDY7 | Receptor protein kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07914 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology