HalophFGD

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Basic Information
Locus ID: Lb1G04860
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Encoded by
Maps and Mapping Data
Chromosome Start End Strand ID
chr01 351745588 351747479 + Lb1G04860
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.68 59,832.26 Da 46.86 71.09 -0.63
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03108 MuDR family transposase 132 193 2.7E-7 IPR004332
Pfam PF03108 MuDR family transposase 132 193 2.7E-7 IPR004332
MobiDBLite mobidb-lite consensus disorder prediction 50 73 - -
MobiDBLite mobidb-lite consensus disorder prediction 50 73 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_020987463.2 uncharacterized protein LOC107464565 [Arachis duranensis] 0
TrEMBL A0A6P4BBQ4 uncharacterized protein LOC107465153 OS=Arachis duranensis OX=130453 GN=LOC107465153 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 54 Lb0G38191, Lb1G00152, Lb1G01738, Lb1G01898, Lb1G01970 ...
Lb1G02170, Lb1G03410, Lb1G04802, Lb1G04860, Lb1G04877, Lb1G07890, Lb1G07944, Lb2G08659, Lb2G09586, Lb2G09591, Lb2G10075, Lb2G10475, Lb2G10578, Lb2G10668, Lb2G11077, Lb2G11289, Lb2G11804, Lb2G11954, Lb2G12095, Lb2G12133, Lb2G13366, Lb2G13379, Lb3G15831, Lb3G15867, Lb3G16624, Lb3G16954, Lb3G18832, Lb4G22893, Lb4G23098, Lb4G23597, Lb4G23677, Lb4G23739, Lb4G24043, Lb4G24253, Lb4G24543, Lb4G24773, Lb5G26722, Lb5G26822, Lb5G27140, Lb6G29635, Lb6G30380, Lb6G30854, Lb6G31511, Lb6G32395, Lb6G32618, Lb7G33165, Lb7G35351, Lb7G35516, Lb8G36114
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.