Basic Information
Locus ID:
Lb1G04821
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 349086350 | 349091524 | - | Lb1G04821 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 59,358.06 Da | 35.85 | 81.25 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 51 | 309 | 3.00434E-140 | - |
| CDD | cd05117 | STKc_CAMK | 51 | 309 | 3.00434E-140 | - |
| CDD | cd00051 | EFh | 429 | 491 | 2.40833E-18 | IPR002048 |
| CDD | cd00051 | EFh | 429 | 491 | 2.40833E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 428 | 491 | 4.4E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 358 | 416 | 7.1E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 428 | 491 | 4.4E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 52 | 310 | 3.5E-76 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 358 | 416 | 7.1E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 52 | 310 | 3.5E-76 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 48 | 317 | 2.02E-87 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 339 | 517 | 1.01E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 48 | 317 | 2.02E-87 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 339 | 517 | 1.01E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 318 | 2.1E-60 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 318 | 2.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 133 | 6.7E-26 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 319 | 493 | 1.4E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 133 | 6.7E-26 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 319 | 493 | 1.4E-51 | - |
| SMART | SM00054 | efh_1 | 357 | 385 | 0.1 | IPR002048 |
| SMART | SM00220 | serkin_6 | 52 | 310 | 3.7E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 465 | 493 | 7.7E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 429 | 457 | 0.018 | IPR002048 |
| SMART | SM00054 | efh_1 | 393 | 421 | 0.43 | IPR002048 |
| SMART | SM00054 | efh_1 | 357 | 385 | 0.1 | IPR002048 |
| SMART | SM00054 | efh_1 | 429 | 457 | 0.018 | IPR002048 |
| SMART | SM00054 | efh_1 | 393 | 421 | 0.43 | IPR002048 |
| SMART | SM00054 | efh_1 | 465 | 493 | 7.7E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 52 | 310 | 3.7E-101 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 461 | 496 | 14.346033 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 425 | 460 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 389 | 424 | 9.26907 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 461 | 496 | 14.346033 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 52 | 310 | 49.813175 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 425 | 460 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 353 | 388 | 11.640179 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 353 | 388 | 11.640179 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 52 | 310 | 49.813175 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 389 | 424 | 9.26907 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 474 | 486 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 438 | 450 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 402 | 414 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 438 | 450 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 402 | 414 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 58 | 81 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 474 | 486 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 58 | 81 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_023916044.1 | calcium-dependent protein kinase 8-like [Quercus suber] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GF31 | Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23677 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology