Basic Information
Locus ID:
Lb1G04802
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 348557717 | 348569649 | - | Lb1G04802 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 112,436.89 Da | 48.42 | 73.14 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04770 | ZF-HD protein dimerisation region | 806 | 858 | 7.0E-26 | IPR006456 |
| Pfam | PF04434 | SWIM zinc finger | 596 | 622 | 1.9E-5 | IPR007527 |
| Pfam | PF04434 | SWIM zinc finger | 596 | 622 | 1.9E-5 | IPR007527 |
| Pfam | PF03108 | MuDR family transposase | 132 | 187 | 4.9E-6 | IPR004332 |
| Pfam | PF10551 | MULE transposase domain | 333 | 431 | 1.7E-15 | IPR018289 |
| Pfam | PF10551 | MULE transposase domain | 333 | 431 | 1.7E-15 | IPR018289 |
| Pfam | PF04770 | ZF-HD protein dimerisation region | 806 | 858 | 7.0E-26 | IPR006456 |
| Pfam | PF03108 | MuDR family transposase | 132 | 187 | 4.9E-6 | IPR004332 |
| TIGRFAM | TIGR01566 | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 807 | 858 | 2.0E-27 | IPR006456 |
| TIGRFAM | TIGR01566 | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 807 | 858 | 2.0E-27 | IPR006456 |
| ProSiteProfiles | PS51523 | Zinc-finger ZF-HD dimerization-type profile. | 808 | 857 | 24.958103 | IPR006456 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 596 | 628 | 9.606424 | IPR007527 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 596 | 628 | 9.606424 | IPR007527 |
| ProSiteProfiles | PS51523 | Zinc-finger ZF-HD dimerization-type profile. | 808 | 857 | 24.958103 | IPR006456 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 755 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49920.1 | MuDR family transposase. | 0 |
| RefSeq | XP_020976587.1 | uncharacterized protein LOC107636197 [Arachis ipaensis] | 0 |
| Q9M9S0 | Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A444ZID8 | SWIM-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B04g070687 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||