Basic Information
Locus ID:
Lb1G04727
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 346177373 | 346180336 | - | Lb1G04727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 90,322.19 Da | 41.69 | 92.63 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 0.27 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 0.27 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 57 | 79 | 0.076 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 106 | 128 | 0.088 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 646 | 753 | 4.8E-23 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 178 | 238 | 6.1E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 57 | 79 | 0.076 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 646 | 753 | 4.8E-23 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 106 | 128 | 0.088 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 178 | 238 | 6.1E-9 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 283 | 525 | 2.04E-31 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 338 | 3.74E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 338 | 3.74E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 644 | 800 | 4.65E-38 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 283 | 525 | 2.04E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 644 | 800 | 4.65E-38 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 102 | 4.8E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 103 | 173 | 4.4E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 594 | 804 | 1.8E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 415 | 587 | 1.3E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 414 | 1.6E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 414 | 1.6E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 103 | 173 | 4.4E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 594 | 804 | 1.8E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 415 | 587 | 1.3E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 102 | 4.8E-15 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 177 | 200 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 128 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 55 | 79 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 392 | 416 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 296 | 300.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 507 | 803 | 1.2E-5 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 177 | 200 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 392 | 416 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 296 | 300.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 507 | 803 | 1.2E-5 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 3.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 55 | 79 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 128 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 462 | 485 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 3.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 462 | 485 | 39.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 465 | 806 | 19.001055 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 465 | 806 | 19.001055 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 657 | 669 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 657 | 669 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021819478.1 | receptor-like protein kinase HSL1 [Prunus avium] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5T0C3 | receptor-like protein kinase HSL1 OS=Prunus avium OX=42229 GN=LOC110761321 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology