Basic Information
Locus ID:
Lb1G04450
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 337723493 | 337730299 | - | Lb1G04450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 124,520.47 Da | 45.37 | 80.62 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 698 | 988 | 5.71359E-170 | - |
| CDD | cd05579 | STKc_MAST_like | 698 | 988 | 5.71359E-170 | - |
| Pfam | PF00069 | Protein kinase domain | 692 | 982 | 3.9E-62 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 692 | 982 | 3.9E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 689 | 1015 | 3.37E-91 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 689 | 1015 | 3.37E-91 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 1001 | 3.8E-107 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 1001 | 3.8E-107 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 1011 | 3.8E-107 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 1011 | 3.8E-107 | - |
| SMART | SM00220 | serkin_6 | 692 | 983 | 3.8E-104 | IPR000719 |
| SMART | SM00220 | serkin_6 | 692 | 983 | 3.8E-104 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 984 | 1089 | 9.460622 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 983 | 51.509254 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 984 | 1089 | 9.460622 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 983 | 51.509254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| Coils | Coil | Coil | 467 | 487 | - | - |
| Coils | Coil | Coil | 467 | 487 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_010672008.2 | probable serine/threonine protein kinase IRE isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A0J8CQP3 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_3g055890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology