halophFGD

Basic Information

Locus ID: Lb1G04369

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr01	335349591	335360398	-	Lb1G04369

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.60	227,717.77 Da	50.75	75.39	-0.58

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00303	retropepsin_like	753	834	5.04386E-17	-
CDD	cd00303	retropepsin_like	753	834	5.04386E-17	-
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1856	1945	4.2E-8	IPR003653
Pfam	PF02992	Transposase family tnp2	921	1021	9.4E-43	IPR004242
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1856	1945	4.2E-8	IPR003653
Pfam	PF03732	Retrotransposon gag protein	131	223	6.2E-17	IPR005162
Pfam	PF02992	Transposase family tnp2	921	1021	9.4E-43	IPR004242
Pfam	PF03732	Retrotransposon gag protein	131	223	6.2E-17	IPR005162
SUPERFAMILY	SSF54001	Cysteine proteinases	1790	1949	3.92E-21	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1790	1949	3.92E-21	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1776	1964	3.9E-15	-
Gene3D	G3DSA:2.40.70.10	Acid Proteases	717	860	7.8E-25	IPR021109
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1776	1964	3.9E-15	-
Gene3D	G3DSA:2.40.70.10	Acid Proteases	717	860	7.8E-25	IPR021109
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1756	1948	9.482422	IPR003653
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1756	1948	9.482422	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	1277	1297	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	379	409	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	379	442	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	599	631	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	416	441	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	615	631	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1599	1621	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1599	1621	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	599	631	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	416	441	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	379	442	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	615	631	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	379	409	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1277	1297	-	-
Coils	Coil	Coil	1568	1588	-	-
Coils	Coil	Coil	571	591	-	-
Coils	Coil	Coil	571	591	-	-
Coils	Coil	Coil	1568	1588	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_027362476.1	uncharacterized protein LOC113870076 [Abrus precatorius]	0
TrEMBL	A0A8B8M1E5	uncharacterized protein LOC113870076 OS=Abrus precatorius OX=3816 GN=LOC113870076 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047