Basic Information
Locus ID:
Lb1G04343
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 334584684 | 334596414 | + | Lb1G04343 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 55,302.75 Da | 37.25 | 82.89 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07993 | Male sterility protein | 361 | 484 | 3.5E-17 | IPR013120 |
| Pfam | PF07993 | Male sterility protein | 361 | 484 | 3.5E-17 | IPR013120 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 383 | 470 | 3.94E-6 | IPR036291 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 24 | 359 | 3.4E-8 | IPR036322 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 383 | 470 | 3.94E-6 | IPR036291 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 24 | 359 | 3.4E-8 | IPR036322 |
| Gene3D | G3DSA:3.40.50.720 | - | 345 | 485 | 2.8E-9 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 7 | 71 | 8.9E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 7 | 71 | 8.9E-8 | IPR015943 |
| Gene3D | G3DSA:3.40.50.720 | - | 345 | 485 | 2.8E-9 | - |
| SMART | SM00320 | WD40_4 | 15 | 53 | 2.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 15 | 53 | 2.6E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 21 | 62 | 11.477578 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 21 | 56 | 9.09833 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 21 | 62 | 11.477578 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 21 | 56 | 9.09833 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 40 | 54 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 40 | 54 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44540.2 | fatty acid reductase 4. Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue. | 0 |
| RefSeq | XP_019247889.1 | PREDICTED: alcohol-forming fatty acyl-CoA reductase-like isoform X3 [Nicotiana attenuata] | 0 |
| Q9LXN3 | Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A4LZ48 | Fatty acyl-CoA reductase (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_04713 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||