halophFGD

Basic Information

Locus ID: Lb1G04325

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr01	334017285	334027348	+	Lb1G04325

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.18	228,951.92 Da	51.09	84.84	-0.59

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd01373	KISc_KLP2_like	198	545	0.0	-
CDD	cd01373	KISc_KLP2_like	198	545	0.0	-
Pfam	PF00225	Kinesin motor domain	206	536	3.0E-109	IPR001752
Pfam	PF00225	Kinesin motor domain	206	536	3.0E-109	IPR001752
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	199	567	1.09E-118	IPR027417
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	199	567	1.09E-118	IPR027417
Gene3D	G3DSA:3.40.850.10	Kinesin motor domain	193	548	1.0E-137	IPR036961
Gene3D	G3DSA:3.40.850.10	Kinesin motor domain	193	548	1.0E-137	IPR036961
SMART	SM00129	kinesin_4	197	544	9.3E-163	IPR001752
SMART	SM00129	kinesin_4	197	544	9.3E-163	IPR001752
ProSiteProfiles	PS50067	Kinesin motor domain profile.	199	536	122.066444	IPR001752
ProSiteProfiles	PS50067	Kinesin motor domain profile.	199	536	122.066444	IPR001752
ProSitePatterns	PS00411	Kinesin motor domain signature.	432	443	-	IPR019821
ProSitePatterns	PS00411	Kinesin motor domain signature.	432	443	-	IPR019821
PRINTS	PR00380	Kinesin heavy chain signature	271	292	2.6E-41	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	433	451	2.6E-41	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	433	451	2.6E-41	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	486	507	2.6E-41	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	271	292	2.6E-41	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	400	417	2.6E-41	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	486	507	2.6E-41	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	400	417	2.6E-41	IPR001752
MobiDBLite	mobidb-lite	consensus disorder prediction	1	94	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1980	2007	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1980	1997	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	42	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	108	134	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	94	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1980	1997	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	42	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	108	134	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1980	2007	-	-
Coils	Coil	Coil	778	798	-	-
Coils	Coil	Coil	2008	2037	-	-
Coils	Coil	Coil	1747	1774	-	-
Coils	Coil	Coil	1624	1658	-	-
Coils	Coil	Coil	696	723	-	-
Coils	Coil	Coil	1715	1735	-	-
Coils	Coil	Coil	1575	1602	-	-
Coils	Coil	Coil	1462	1559	-	-
Coils	Coil	Coil	550	570	-	-
Coils	Coil	Coil	628	648	-	-
Coils	Coil	Coil	1959	1979	-	-
Coils	Coil	Coil	550	570	-	-
Coils	Coil	Coil	696	723	-	-
Coils	Coil	Coil	778	798	-	-
Coils	Coil	Coil	1462	1559	-	-
Coils	Coil	Coil	1575	1602	-	-
Coils	Coil	Coil	1747	1774	-	-
Coils	Coil	Coil	1624	1658	-	-
Coils	Coil	Coil	1896	1944	-	-
Coils	Coil	Coil	1896	1944	-	-
Coils	Coil	Coil	1959	1979	-	-
Coils	Coil	Coil	2008	2037	-	-
Coils	Coil	Coil	628	648	-	-
Coils	Coil	Coil	1715	1735	-	-

Gene Ontology

Biological Process:

GO:0007018 (microtubule-based movement)

Molecular Function:

GO:0003777 (microtubule motor activity) GO:0005524 (ATP binding) GO:0008017 (microtubule binding)

KEGG Pathway

KO Term:

K10400 (kinesin family member 15)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G17360.2	-
RefSeq	XP_034199149.1	kinesin-like protein KIN-12C isoform X2 [Prunus dulcis]
Swiss-Prot	Q27IK7	Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1
TrEMBL	A0A6J5W4B6	Kinesin motor domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS1761 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg1050, jg12327, jg28708, jg36061
Aizoaceae	Mesembryanthemum crystallinum	3	gene_21585, gene_5744, gene_5745
Amaranthaceae	Atriplex hortensis	2	Ah010361, Ah027761
Amaranthaceae	Beta vulgaris	2	BVRB_7g171450, BVRB_9g218530
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg1474, Sbi_jg26557, Sbi_jg34007, Sbi_jg35083 ... Sbi_jg39603, Sbi_jg39604
Amaranthaceae	Salicornia europaea	2	Seu_jg15082, Seu_jg3268
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00003438, GOSA_00019691, GOSA_00019692
Amaranthaceae	Suaeda glauca	4	Sgl00036, Sgl05109, Sgl72698, Sgl76237
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000007002, gene:ENSEOMG00000018937 ... gene:ENSEOMG00000039830, gene:ENSEOMG00000043440, gene:ENSEOMG00000053043
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.7AG0005140, CQ.Regalona.r1.7AG0005150 ... CQ.Regalona.r1.7BG0008660, CQ.Regalona.r1.9AG0015780, CQ.Regalona.r1.9BG0000660
Anacardiaceae	Pistacia vera	5	pistato.v30055570, pistato.v30113250, pistato.v30187920 ... pistato.v30232340, pistato.v30287400
Apiaceae	Apium graveolens	4	Ag1G02040, Ag5G01775, Ag6G02230, Ag9G00142
Arecaceae	Cocos nucifera	4	COCNU_03G000010, COCNU_04G009820, COCNU_04G010440 ... COCNU_06G017700
Arecaceae	Phoenix dactylifera	3	gene-LOC103701143, gene-LOC103707297, gene-LOC103709188
Asparagaceae	Asparagus officinalis	3	AsparagusV1_05.1640.V1.1, AsparagusV1_07.1083.V1.1 ... AsparagusV1_07.3115.V1.1
Asteraceae	Flaveria trinervia	4	Ftri14G10302, Ftri15G09275, Ftri16G04182, Ftri17G01101
Brassicaceae	Arabidopsis thaliana	3	AT3G17360.1, AT3G19050.1, AT3G44050.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10010073m.g.v1.0, Thhalv10019870m.g.v1.0 ... Thhalv10019874m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp3g15530.v2.2, Sp3g17150.v2.2, Sp5g17250.v2.2
Brassicaceae	Brassica nigra	3	BniB01g045320.2N, BniB01g047410.2N, BniB08g056860.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq05G1531, Ceq07G1976, Ceq09G1410
Casuarinaceae	Casuarina glauca	3	Cgl05G1530, Cgl07G2172, Cgl09G1502
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno01g00190, gene.Cymno01g15360, gene.Cymno04g06760 ... gene.Cymno05g06170
Dunaliellaceae	Dunaliella salina	8	Dusal.0038s00038.v1.0, Dusal.0040s00027.v1.0 ... Dusal.0041s00037.v1.0, Dusal.0224s00019.v1.0, Dusal.0225s00005.v1.0, Dusal.0284s00013.v1.0, Dusal.0342s00004.v1.0, Dusal.0699s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g39880, gene.Thate04g14110, gene.Thate06g13200
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-11921, nbisL1-mrna-444, nbisL1-mrna-5477
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG08.41, evm.TU.LG09.520, evm.TU.LG09.521 ... evm.TU.LG11.1122
Plantaginaceae	Plantago ovata	3	Pov_00015724, Pov_00026333, Pov_00035518
Plumbaginaceae	Limonium bicolor	4	Lb1G04325, Lb3G17181, Lb3G19277, Lb3G19281
Poaceae	Echinochloa crus-galli	11	AH03.3839, AH05.3873, BH01.716, BH03.4124, BH05.3978 ... BH06.2885, CH01.713, CH03.4399, CH03.4838, CH05.4192, Contig309.73
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_3AG0215980, gene-QOZ80_3BG0261250
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0120880.1, HORVU.MOREX.r3.5HG0437720.1 ... HORVU.MOREX.r3.5HG0438440.1, HORVU.MOREX.r3.5HG0510860.1
Poaceae	Lolium multiflorum	5	gene-QYE76_000502, gene-QYE76_000517, gene-QYE76_035819 ... gene-QYE76_039349, gene-QYE76_061813
Poaceae	Oryza coarctata	5	Oco05G023700, Oco06G024620, Oco13G013850, Oco14G014660 ... Oco24G009220
Poaceae	Oryza sativa	3	LOC_Os03g53920.1, LOC_Os07g44400.1, LOC_Os12g39980.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G080100, gene-BS78_02G366100 ... gene-BS78_08G123300
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0107185, Pt_Chr0304831, Pt_Chr0704135, Pt_Chr0704142 ... Pt_Chr0704161
Poaceae	Sporobolus alterniflorus	8	Chr04G018200, Chr04G028640, Chr06G018820, Chr07G027600 ... Chr12G037590, Chr24G013970, Chr24G014160, Chr28G012770
Poaceae	Thinopyrum elongatum	5	Tel2E01G301100, Tel5E01G138600, Tel5E01G138700 ... Tel5E01G141300, Tel5E01G620200
Poaceae	Triticum dicoccoides	8	gene_TRIDC2AG018780, gene_TRIDC2BG022610 ... gene_TRIDC5AG010190, gene_TRIDC5AG010330, gene_TRIDC5AG056840, gene_TRIDC5BG011820, gene_TRIDC5BG012080, gene_TRIDC5BG060980
Poaceae	Triticum aestivum	10	TraesCS2A02G149500.1, TraesCS2B02G174600.1 ... TraesCS2D02G154600.1, TraesCS5A02G067300.1, TraesCS5A02G390000.1, TraesCS5B02G072900.1, TraesCS5B02G074200.1, TraesCS5B02G395000.1, TraesCS5D02G078500.1, TraesCS5D02G399800.1
Poaceae	Zea mays	4	Zm00001eb057370_P001, Zm00001eb135060_P001 ... Zm00001eb210340_P001, Zm00001eb328750_P001
Poaceae	Zoysia japonica	3	nbis-gene-15074, nbis-gene-263, nbis-gene-30461
Poaceae	Zoysia macrostachya	3	Zma_g26049, Zma_g473, Zma_g6938
Portulacaceae	Portulaca oleracea	5	evm.TU.LG02.1872, evm.TU.LG02.428, evm.TU.LG05.2228 ... evm.TU.LG07.1345, evm.TU.LG08.1886
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g12950, gene.Posoc03g00470, gene.Posoc03g28550
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_12_RagTag.486, evm.TU.Scaffold_1_RagTag.2133 ... evm.TU.Scaffold_2_RagTag.275, evm.TU.Scaffold_3_RagTag.701
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-1267, nbisL1-mrna-24257, nbisL1-mrna-4922 ... nbisL1-mrna-5936
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-12899, nbisL1-mrna-16941, nbisL1-mrna-18477
Rhizophoraceae	Ceriops zippeliana	6	nbisL1-mrna-19741, nbisL1-mrna-3404, nbisL1-mrna-6384 ... nbisL1-mrna-6385, nbisL1-mrna-6386, nbisL1-mrna-6387
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000016l.189, evm.TU.utg000019l.791 ... evm.TU.utg000027l.268
Rhizophoraceae	Kandelia obovata	3	Maker00012574, Maker00016779, Maker00017901
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-18826, nbisL1-mrna-4749, nbisL1-mrna-5714
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-11966, nbisL1-mrna-13135, nbisL1-mrna-14064 ... nbisL1-mrna-6109
Salicaceae	Populus euphratica	5	populus_peu08519, populus_peu08958, populus_peu08959 ... populus_peu20736, populus_peu36831
Solanaceae	Lycium barbarum	3	gene-LOC132599085, gene-LOC132600674, gene-LOC132626609
Solanaceae	Solanum chilense	4	SOLCI002697400, SOLCI003294100, SOLCI004338900 ... SOLCI004339000
Solanaceae	Solanum pennellii	3	gene-LOC107005003, gene-LOC107006540, gene-LOC107007729
Tamaricaceae	Reaumuria soongarica	3	MSTRG.11965_chr07_+, STRG.11368_chr02_-, gene_3022
Tamaricaceae	Tamarix chinensis	4	TC08G0528, TC08G0529, TC10G0544, TC11G1278
Zosteraceae	Zostera marina	3	Zosma03g17300.v3.1, Zosma03g18100.v3.1, Zosma05g33120.v3.1