Basic Information
Locus ID:
Lb1G04321
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
DRM3
Description:
DNA (cytosine-5-)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 333851286 | 333862650 | - | Lb1G04321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 123,600.82 Da | 49.05 | 75.87 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12874 | Zinc-finger of C2H2 type | 832 | 854 | 1.1E-5 | - |
| Pfam | PF12874 | Zinc-finger of C2H2 type | 832 | 854 | 1.1E-5 | - |
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers | 824 | 863 | 2.78E-5 | IPR036236 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 378 | 570 | 1.5E-7 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 577 | 667 | 4.98E-7 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 577 | 667 | 4.98E-7 | IPR029063 |
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers | 824 | 863 | 2.78E-5 | IPR036236 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 378 | 570 | 1.5E-7 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 576 | 719 | 2.6E-16 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 576 | 719 | 2.6E-16 | - |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 372 | 713 | 104.356949 | IPR030380 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 372 | 713 | 104.356949 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 946 | 972 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 972 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1067 | 1097 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 862 | 885 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 938 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1067 | 1116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 938 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 862 | 885 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1067 | 1116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 946 | 972 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 972 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1067 | 1097 | - | - |
| Coils | Coil | Coil | 1027 | 1047 | - | - |
| Coils | Coil | Coil | 1027 | 1047 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17310.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. | 0 |
| RefSeq | XP_021756996.1 | probable inactive DNA (cytosine-5)-methyltransferase DRM3 isoform X1 [Chenopodium quinoa] | 0 |
| Q6AUQ7 | Probable inactive DNA (cytosine-5)-methyltransferase DRM3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QV53 | SAM-dependent MTase DRM-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_137920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology