Basic Information
Locus ID:
Lb1G04246
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 331226646 | 331231203 | + | Lb1G04246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.56 | 53,702.88 Da | 44.90 | 71.21 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14125 | STKc_CK1_delta_epsilon | 10 | 284 | 0.0 | - |
| CDD | cd14125 | STKc_CK1_delta_epsilon | 10 | 284 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 12 | 226 | 3.3E-26 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 12 | 226 | 3.3E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 292 | 4.99E-83 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 292 | 4.99E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 306 | 6.1E-111 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 306 | 6.1E-111 | - |
| SMART | SM00220 | serkin_6 | 11 | 303 | 1.1E-12 | IPR000719 |
| SMART | SM00220 | serkin_6 | 11 | 303 | 1.1E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 11 | 280 | 29.799431 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 11 | 280 | 29.799431 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 17 | 40 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 126 | 138 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 17 | 40 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 126 | 138 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 436 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 436 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 346 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26100.1 | casein kinase 1. Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization. | 0 |
| RefSeq | XP_010685356.1 | casein kinase 1-like protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| P42158 | Casein kinase 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CKL1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N5GYJ4 | Casein kinase I OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039603 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology