Basic Information
Locus ID:
Lb1G04173
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
AFC2
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 328914255 | 328918206 | + | Lb1G04173 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 50,110.32 Da | 41.05 | 90.48 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 87 | 426 | 0.0 | - |
| CDD | cd14134 | PKc_CLK | 87 | 426 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 100 | 426 | 5.8E-48 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 100 | 426 | 5.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 430 | 3.33E-79 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 430 | 3.33E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 180 | 1.4E-109 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 180 | 1.4E-109 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 426 | 1.4E-109 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 426 | 1.4E-109 | - |
| SMART | SM00220 | serkin_6 | 100 | 426 | 4.8E-72 | IPR000719 |
| SMART | SM00220 | serkin_6 | 100 | 426 | 4.8E-72 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 426 | 37.318718 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 426 | 37.318718 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 106 | 136 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 221 | 233 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 221 | 233 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 106 | 136 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 30 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.1 | FUS3-complementing gene 2. a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. | 0 |
| RefSeq | XP_048503746.1 | serine/threonine-protein kinase AFC2-like isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P51567 | Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8B2X2 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_009240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology